Algorithms in Computational Molecular Biology: Techniques, Approaches and Applications (Wiley Series in Bioinformatics)
April 14, 2011 by Bioinformatics Computational Biology · Leave a Comment
Algorithms in Computational Molecular Biology: Techniques, Approaches and Applications (Wiley Series in Bioinformatics)

This book represents the most comprehensive and up-to-date collection of information on the topic of computational molecular biology. Bringing the most recent research into the forefront of discussion, Algorithms in Computational Molecular Biology studies the most important and useful algorithms currently being used in the field, and provides related problems. It also succeeds where other titles have failed, in offering a wide range of information from the introductory fundamentals right up to the latest, most advanced levels of study.

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Algorithms in Bioinformatics: A Practical Introduction (Chapman & Hall/CRC Mathematical & Computational Biology)
April 14, 2011 by Bioinformatics Computational Biology · Leave a Comment
Algorithms in Bioinformatics: A Practical Introduction (Chapman & Hall/CRC Mathematical & Computational Biology)
Thoroughly Describes Biological Applications, Computational Problems, and Various Algorithmic Solutions
Developed from the author’s own teaching material, Algorithms in Bioinformatics: A Practical Introduction provides an in-depth introduction to the algorithmic techniques applied in bioinformatics. For each topic, the author clearly details the biological motivation and precisely defines the corresponding computational problems. He also includes detailed examples to illustrate each algorithm and end-of-chapter exercises for students to familiarize themselves with the topics. Supplementary material is available at http://www.comp.nus.edu.sg/~ksung/algo_in_bioinfo/
This classroom-tested textbook begins with basic molecular biology concepts. It then describes ways to measure sequence similarity, presents simple applications of the suffix tree, and discusses the problem of searching sequence databases. After introducing methods for aligning multiple biological sequences and genomes, the text explores applications of the phylogenetic tree, methods for comparing phylogenetic trees, the problem of genome rearrangement, and the problem of motif finding. It also covers methods for predicting the secondary structure of RNA and for reconstructing the peptide sequence using mass spectrometry. The final chapter examines the computational problem related to population genetics.
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Bioinformatics: An Introduction (Computational Biology)
April 11, 2011 by Bioinformatics Computational Biology · Leave a Comment
Bioinformatics: An Introduction (Computational Biology)

Bioinformatics is interpreted as the application of information science to biology, in which it plays a fundamental and all-pervasive role. The field continues to develop intensively in both academia and commercially, and is highly interdisciplinary. This broad-ranging and thoroughly updated second edition covers new findings while retaining the successful formula of the original text.
Bioinformatics: An Introduction is structured into three parts devoted to Information, Biology, and Applications. Every section of the book has been completely revised for currency, and expanded where relevant, to take account of significant new discoveries and realizations of the importance of key concepts. Furthermore, two new chapters provide instruction about algorithms and knowledge representation. Emphases are placed on the underlying fundamentals and on acquisition of a broad and comprehensive grasp of the field as a whole.
Features:
• Provides a solid foundation in, and self-contained introduction to, the field of bioinformatics and its state-of-the-art as it relates to computational biology research
• Imparts a thorough grounding of core concepts, enabling the reader to understand contemporary work within an optimal context
• Includes examples, definitions, problems and a comprehensive and useful bibliography
• Offers additional chapters on algorithms and knowledge representation, including text mining [NEW]
• Presents new experimental methods, and serves as a springboard for new research [NEW]
• Contains a greatly expanded chapter on interactions and regulatory networks [NEW]
• Incorporates discussion of the method of drawing inferences from abstract sequence analysis based on frequency dictionaries
• Contains an extensively revised chapter on medical applications [NEW]
• Emphasizes the underlying fundamentals and acquisition of a broad and comprehensive grasp of the field as a whole
This significantly improved second edition of a successful textbook is intended to be a complete study companion for the advanced undergraduate or graduate student. It is self-contained, bringing together the multiple disciplines necessary for a profound grasp of the field into a coherent whole, thereby allowing the reader to gain much insight into the state-of-the-art of bioinformatics.

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Bioinformatics for Omics Data: Methods and Protocols (Methods in Molecular Biology)
April 11, 2011 by Bioinformatics Computational Biology · Leave a Comment
Bioinformatics for Omics Data: Methods and Protocols (Methods in Molecular Biology)
Presenting an area of research that intersects with and integrates diverse disciplines, including molecular biology, applied informatics, and statistics, among others, Bioinformatics for Omics Data: Methods and Protocols collects contributions from expert researchers in order to provide practical guidelines to this complex study. Divided into three convenient sections, this detailed volume covers central analysis strategies, standardization and data-management guidelines, and fundamental statistics for analyzing Omics profiles, followed by a section on bioinformatics approaches for specific Omics tracks, spanning genome, transcriptome, proteome, and metabolome levels, as well as an assortment of examples of integrated Omics bioinformatics applications, complemented by case studies on biomarker and target identification in the context of human disease. Written in the highly successful Methods in Molecular Biology™ series format, chapters contain introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and notes on troubleshooting and avoiding known pitfalls.
Authoritative and accessible, Bioinformatics for Omics Data: Methods and Protocols serves as an ideal guide to scientists of all backgrounds and aims to convey the appropriate sense of fascination associated with this research field.
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The Statistics of Gene Mapping (Statistics for Biology and Health)
April 11, 2011 by Bioinformatics Computational Biology · Leave a Comment
The Statistics of Gene Mapping (Statistics for Biology and Health)
This book details the statistical concepts used in gene mapping, first in the experimental context of crosses of inbred lines and then in outbred populations, primarily humans. It presents elementary principles of probability and statistics, which are implemented by computational tools based on the R programming language to simulate genetic experiments and evaluate statistical analyses. Each chapter contains exercises, both theoretical and computational, some routine and others that are more challenging. The R programming language is developed in the text.
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